Stacy Krueger-Hadfield wrote a nice blog piece for The Molecular Ecologists covering some of our work on modelling uncertainty in DNA sequence data. As she notes, we have long-advocated for propagating uncertainty in genotype into inferences of population genetic parameters (e.g., measures of differentiation, introgression, etc.). This provides more honest measures of overall uncertainty and allows one to take advantage of lower-coverage sequence data. Check out her post here.