The USU Biology Department is moving into a new building this spring, and the new building includes a Science Garden Laboratory that was developed as an extension of our lab’s Dimensions of Biodiversity NSF grant (DEB #1638768). The garden includes ~200 alfalfa (Medicago sativa) plants. This is a host plant currently used by Lycaeides butterflies, and one key area of research in our lab considers the recent and repeated shift of L. melissa butterflies from various native legumes to this introduced host plant. These specific plants were used in an experiment this past summer, and will be used in a number of experiments on plant-insect interactions run by undergraduates as part of the introductory biology sequence (led by Lauren Lucas). Some of these experiments will be conducted in collaboration with my lab group. You can read an article about the Science Garden Laboratory here.
A picture of the garden shortly after we finished planting.
Our paper (led by Lauren Lucas) on wing pattern genetics and evolution in Lycaeides butterflies is out now as part of a Molecular Ecology Resources special issue on association mapping in natural populations. In this paper, we investigate the genetic architecture of complex wing pattern variation in Lycaeides butterflies as a case study of mapping multivariate traits in wild populations that include multiple nominal species or groups. We take a genomic prediction approach that accounts for the possibility that wing pattern elements are affected by many genetic loci with small effects, and we assess trait architectures at multiple hierarchical levels of biological organization. We identify conserved modules of integrated wing pattern elements within populations and species, and we find evidence that evolutionary changes in wing patterns among populations and species occur in the directions of genetic covariances within these groups. Thus, we show that genetic constraints affect patterns of biological diversity (wing pattern) in Lycaeides, and we provide an analytical template for similar work in other systems.
You can check out the entire special issue here, and see PhD student Amy Springer’s awesome digital drawings of Lycaeides wing patterns below.
Sam’s paper on the the predictability of genome‐wide evolutionary changes associated with a recent host shift in the Melissa blue butterfly (Lycaeides melissa) is now out in Molecular Ecology. The main messages from this paper are that predictability is quantitative rather than binary, and that evolutionary change can be more or less predictable depending on the basis of those predictions. Specifically, we show that genome-wide evolutionary changes are better predicted from comparison among repeated host shifts than from gene-by-performance associations detected in lab experiments.
Also check out Catherine Linnen’s News and Views article covering Sam’s paper.
Lycaeides melissa female on alfalfa.
Timema cristinae, Ceanothus, PR, photo by Moritz Muschick
Check out our new paper the predictability of morph frequency evolution in Timema cristinae stick insects, which was published this week in Science. Patrik Nosil and I each wrote blog posts on the paper.
For those interested, here is Patrik’s blog post on Eco-Evo Evo-Eco, and my post with Nature E&E’s Behind the Paper.
And for those who want more, here are links to media coverage of the paper, which I will update as necessary.
Comes naturally? Using stick insects to study natural selection, predictability of evolution
¿Cómo de predecible es la evolución?
We (Lauren and I) gave a public talk as part of USU’s Science Unwrapped series on the connection between art and science in Vladmir Nabokov’s work as a novelist and systematist and the connection of his work to our own on Lycaeides butterflies. PhD student Amy Springer made a guest appearance as Nabokov and the whole lab was involved in activities related to talk. Check out the full video below, which includes a butterfly release by kids in cages.
Watch the video.
Nabokov resurrected getting set up for a camera lucida demonstration.
Lauren leading a wing pattern classification demonstration.
The whole gang.
In a new ‘From the Cover’ paper out in Molecular Ecology (led by Doro Lindtke), we show that color and color pattern in Timema cristinate map to a single region of reduced recombination (likely an inversion) and that overdominance (i.e., heterozygote advantage) promotes the persistence of green and melanistic color morphs. The paper was accompanied by a News and Views piece on the role of balancing selection in the maintenance of variation.
This photo, taken by Moritz Muschick, shows green (unstriped) and melanistic Timema cristinae color morphs and appears on the cover of Molecular Ecology volume 26, issue 22.
Sam’s paper assessing determinants of variation in Lycaeides melissa caterpillar gut microbiomes is out now in Scientific Reports. We were interested in whether evolutionary or plastic changes in gut microbiome were critical in colonizing novel host plants. Our results presented in this paper suggest that this isn’t the case, and join a growing body of evidence pointing towards a more limited role of gut microbes in Lepidoptera in general (relative to other taxonomic groups where gut microbes are clearly important for growth and development).
You can listen to Sam discuss this work and her research more generally on this Slightly Evolved podcast.
Check out our new review paper on the ‘Analysis of Population Genomic Data from Hybrid Zones‘, which is now available on-line early from the Annual Review of Ecology, Evolution and Systematics.
This is a bit late, but several folks from the lab gave talks at the Evolution meeting in Portland this June. In case you missed them, here are links to video recordings on YouTube.
Lauren Lucas. Genetic constraints on wing pattern variation in Lycaeides butterflies.
Samridhi Chaturvedi. The predictability of genomic changes underlying a recent host shift.
Alex Rego. Genomic basis of rapid adaptation to a low quality host plant.
Amy Springer. Inbreeding depression in an ecological context.
Our paper on speciation in stick insects made the cover of Nature Ecology and Evolution (image by Moritz Muschick). In this paper we show how multiple factors come together for speciation to move from early to late stages of isolation and genomic differentiation, and we identify a distinct gap in genomic differentiation between con- and hetero-specific populations in sympatry.
You can read more about the paper in these blog and news articles:
Eco-evolutionary dynamics blog